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Table 1 Demographic information and tumor characteristics of patients included in genotyping ancillary study

From: Gastrointestinal stromal tumors: a case-only analysis of single nucleotide polymorphisms and somatic mutations

 

Overall sample

Sex stratified

Race stratified

 

N = 279

Male (n = 142)

Female (n = 137)

White (n = 229)

Other (n = 50)

Age: Median (range)

58.0 (18 – 85)

57.0 (18 – 85)

58.0 (18 – 81)

59.0 (18 – 85)

53.0 (27 – 78)

Sex: N (%)

     

Male

142 (51)

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Female

137 (49)

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Race: N (%)

     

White

229 (82)

122 (86)

107 (78)

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Other

50 (18)

20 (14)

30 (22)

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Tumor Size: Median (range)

6.5 (3.0 – 37.0)

6.0 (3.0 – 37.0)

6.5 (3.0 – 28.0)

6.5 (3.0 – 37.0)

6.0 (3.1 – 30.0)

Tumor Size: N(%)

     

<5 cm

79 (28)

41 (29)

38 (28)

65 (28)

14 (28)

5-10 cm

146 (52)

72 (51)

74 (54)

119 (52)

27 (54)

>10 cm

54 (19)

29 (20)

25 (18)

45 (20)

9 (18)

Mitotic Rate: Median (range)

3 (0 – 351)

3 (0 – 351)

3 (0 – 207)

3 (0 – 351)

4.5 (0 – 81)

Mitotic Rate: N(%)

     

<5

156 (60)

77 (58)

79 (63)

132 (62)

24 (50)

≥5

104 (40)

57 (42)

47 (37)

80 (38)

24 (50)

Missing

19

8

11

17

2

Tumor Location: N(%)

     

Stomach

182 (66)

97 (69)

85 (63)

146 (64)

36 (74)

Small Intestine

85 (31)

39 (28)

46 (34)

77 (34)

8 (16)

Rectum

2 (1)

1 (1)

1 (1)

1 (0)

1 (2)

Other

8 (3)

4 (3)

4 (3)

4 (2)

4 (8)

Missing

2

1

1

1

1

Mutation Type: N(%)

     

Exon 9

15 (5)

9 (6)

6 (4)

15 (7)

0 (0)

Exon 11

195 (70)

95 (67)

100 (73)

153 (67)

42 (84)

Exon 13

3 (1)

0 (0)

3 (2)

2 (1)

1 (2)

Exon 14

1 (0)

1 (1)

0 (0)

1 (0)

0 (0)

Exon 17

0 (0)

0 (0)

0 (0)

0 (0)

0 (0)

PDGFRA

29 (10)

21 (15)

8 (6)

25 (11)

4 (8)

Wild type

36 (13)

16 (11)

20 (15)

33 (14)

3 (6)

Exon 11 mutation type: N(%)

     

557-558 deletion

66 (34)

33 (35)

33 (33)

51 (33)

15 (36)

Other deletion

45 (23)

25 (26)

20 (20)

34 (22)

11 (26)

Insertion

28 (14)

14 (15)

14 (14)

23 (15)

5 (12)

Point Mutation

56 (29)

23 (24)

33 (33)

45 (29)

11 (26)

PDGFRA mutation type: N(%)

     

D842V

12 (41)

10 (48)

2 (25)

10 (40)

2 (50)

Other

17 (59)

11 (52)

6 (75)

15 (60)

2 (50)